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Best Payroll Software in Hyderabad 2026 – Top 10 Compared

Discover the best payroll management software in Hyderabad area to manage end-to-end payroll activities. Make timely and accurate payments your forte through our solutions.

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Payroll processing is important for all businesses because it deals with employee pay and company finances. Executing this process manually can cause mistakes, especially when there are many employees. Having a payroll software in Hyderabad makes this easier by automating the task, reducing errors, saving time, and simplifying work. A study by the Hackett Group found that companies using automated payroll had 75% fewer errors and finished the process 25% faster.

Many businesses in Hyderabad now use these online payroll software solutions to ensure accurate payments, comply with regulations, and operate smoothly.

In this article, we take you through the top payroll software in Hyderabad that can assist you in efficient payroll management.

List of the Best 10 Payroll Software in Hyderabad

Based on user ratings, customer feedback, and support for compliance with Indian statutory laws, here are the top 10 payroll software in Hyderabad.

factoHR: One of the best payroll software in Hyderabad that offers a flexible payroll engine, compliance support, and integrates with HRMS. Great choice for all sizes of businesses.
Keka: Teams like it as it combines time tracking and payroll modules. Great option for employers wanting easy-to-use software.
247HRM: Best fit for small and medium-sized businesses needing a single HR and payroll software in Hyderabad.
Spine Technologies: Offers flexible software that manages payroll, attendance, leave, and performance. Best for mid and large-sized businesses.
SumoPayroll: Good choice for small to mid size firms who want a digital payment system that integrates with their existing software.
Super Payroll: Ideal for teams who want their payroll information stored in one place. Firms like its “direct deposit” feature.
Wallet HR: A cloud-based HR and payroll management software that CHROs (chief Human Resources Officers) like because of its HR reports.
HROne: Preferred because it has many automation features like AI-powered voice assistance for automating tasks.
Nitso HRMS: Perfect choice for companies that require an integrated and intuitive software.
IntelliPayroll: An online payroll management software that automates compliance and stores data in a centralized database.

1. factoHR

(4.7)

Overall

4.7

G2 Review

4.7

Google Play Store

4.1

Software Suggest

5.0

Customer Support

4.8

DIY Configuration

4.7

factoHR is a comprehensive HR and payroll software in Hyderabad that takes care of all HR-related functionalities. With its Core HR platform for seamless workforce administration, organizations can efficiently manage employee records, attendance, payroll, and compliance while ensuring smooth integration across HR functions.

The payroll software of factoHR provides easy access to the employee’s self-service portal, where they can view their payments, deductions, taxes, and other information in one place. The platform is formula-driven and has the flexibility to include unlimited earning and deduction components. The factoHR payroll software in Hyderabad streamlines and integrates the whole process.

payroll management software in hyderabad

Features

Flexible payroll engine that helps configure customizable policies.	A secure and centralized database that stores and encrypts all data.
Support for multiple CTC structures and automated salary calculation.	An off-cycle payment feature that helps pay bonuses and other payments.
Compliance support for Telangana LWF, PT, EPF, ESI, and for the new labour codes.	ESS portal. A portal that supports web and app login, allows employees to view and download payslips, and resolves queries with an AI-powered chatbot.

Pricing

Core plan: ₹4,999/month (up to 50 Employees)
Premium plan: ₹5,999/month (up to 50 Employees)
Ultimate plan: ₹6,999/month (up to 50 Employees)

Best Suited for

All sizes of businesses. From 20 to 500 + employees.

2. Keka

Keka payroll software has significantly transformed payroll management in India. It streamlines the entire process, eliminating the month-end challenges faced by HR and finance departments, thereby improving operational efficiency and ensuring regulatory compliance.

Features

Configurable rules-based salary components, offering complete customization
Easy participation of non-finance roles in salary operations
Preview payroll before finalizing and releasing
Payroll processing with intuitive wizards
Combined payroll and time tracking software.

Pricing

Pricing details are not publicly visible.

Best Suited for

Keka is Best Suited for medium to large-sized businesses.

3. 247HRM

247HRM is a powerful and user-friendly HR and payroll software designed to simplify HR processes and boost productivity through a comprehensive suite of tools covering employee onboarding, payroll, leave management, performance tracking, and more. It offers automation, seamless integration, and actionable insights for efficient HR operations.

Features

Employee information management and self-service portal.
Leave and attendance management with real-time integration.
Performance management, including 360-degree feedback and talent analysis.
Customizable workflows and smart authorizations for approvals.
Payroll processing and statutory compliance.

Pricing

Shoot: ₹2,499/month (up to 30 employees), ₹49/additional employee/month.
Sapling: ₹3,999/month (up to 30 employees), ₹99/additional employee/month.
Tree: ₹4,999/month (up to 30 employees), ₹199/additional employee/month.

Best Suited for

247HRM is a good fit for small and medium-sized businesses.

4. Spine Payroll

Spine Technologies offers user-friendly and flexible HR and payroll software solutions created to simplify employee management and payroll processes. Their software efficiently handles employee information, salary calculations, statutory compliance, attendance, leave, and performance management.

Features

Employee management and self-service portal
Attendance and leave management
Reports and analytics for performance tracking
Time and attendance tracking
Payroll processing with tax and statutory compliance

Pricing

Pricing details are not publicly visible.

Best Suited for

Spine Technologies is best suited for medium to large companies

5. SumoPayroll

SumoPayroll is a modern payroll management software made for small and mid-sized businesses. It makes payroll easy, stays compliant with laws, and helps you create reports for making informed decisions. Since it is a cloud-based solution, it simplifies HR tasks, giving you more time to focus on growing your business.

Features

Payroll processing.
Track employee work hours.
Submit expense claims and reimbursements.
Integration with existing systems.
Online salary payments, including digital payment methods.

Pricing

Free: ₹0 for up to 10 employees, ₹35 per employee if above 10.
Timeclock Web and Mobile App: ₹25 per employee.
Leave Management: ₹25 per employee.
Project and Timesheet Management: ₹20 per employee.
Expense Management: ₹15 per employee.
Consultant Management: ₹5 per consultant.

Best Suited for

SumoPayroll is Best Suited for small to large businesses.

6. Super Payroll

Super Payroll by Superworks makes payroll easy and accurate. It helps HR managers handle payroll with just a few taps, easily calculate, check, and process salaries. All payroll details are stored in one place, making it easy to manage compliance and record-keeping.

Features

Customize salary structures and automatically calculate total CTC
Payroll processing and compliance with real-time reports
Manage employee loans with automatic deductions
Direct deposit to employees’ bank accounts

Pricing

Superworks costs ₹3,499 per month for up to 50 employees. There are other plans available, and you can also ask for a custom price based on your company’s requirements.

Best Suited for

Super Payroll is Best Suited for small to large enterprises.

7. Wallet HR

Wallet HR is a comprehensive cloud-based HRMS and payroll software that automates and streamlines the entire employee lifecycle from recruitment to retirement. It provides a centralized platform to manage employee data, attendance, payroll, leave, performance appraisals, and more, helping organizations improve workforce efficiency through HRMS automation and data-driven insights.

Features

Attendance and leave tracking
Recruitment and onboarding tools
Tools for employee performance
HR reports and tools to support better decisions
Quickly process salaries and statutory compliance

Pricing

Pricing is flexible and customized to business needs

Best Suited for

Wallet HR is best suited for businesses of all sizes, small, medium, and large enterprises.

8. HROne

HROne is one of the leading payroll software companies in Hyderabad, designed to simplify and automate complex HR tasks throughout the entire employee lifecycle, from hire to retirement. It offers an intelligent, user-friendly platform with extensive modules and innovative features, including a mobile app and AI-driven tools, to boost HR efficiency and employee experience.

Features

Payroll automation with compliance management
Performance management with real-time tracking
Core HR management with customizable workflows
Attendance and leave management with geo-fencing
AI-powered voice assistant and InboxForHR for task automation

Pricing

Basic: ₹4950/month (up to 50 users), ₹99/additional user/month.
Professional: ₹6500/month (up to 50 users), ₹130/additional user/month.
Offers custom quotes for 50-plus teams under the Enterprise plan.

Best Suited for

HROne is Best Suited for startups and SMBs.

9. Nitso Technologies

Nitso HRMS provides a payroll management system that makes HR and payroll tasks easier for businesses. This cloud-based software helps manage employees effectively and improves teamwork. By integrating payroll with employee performance and HR features, it boosts overall efficiency. The system also gives quick access to several useful features, which are listed below.

Features

Customizable workflows.
Manage all payroll tasks in one place.
ESS portal & Mobile app.
Reports and analytics.
Integration with the attendance management system.

Pricing

Base: ₹3000 per month till 100 employees, ₹30 per employee for more than 100.
Standard: ₹5000 per month till 100 employees, ₹50 per employee for more than 100.
Enterprise: ₹7000 per month till 100 employees, ₹70 per employee for more than 100.
Premium: ₹12000 per month till 100 employees, ₹120 per employee for more than 100.

Best Suited for

Nitso is a good fit for small and medium-sized businesses.

10. IntelliPayroll

IntelliPayroll is a cloud-based HR and payroll software designed to automate salary processing, ensure compliance, and simplify HR processes for businesses of all sizes. It provides a centralized platform to handle employee data, attendance, payroll, leave, performance appraisals, and more, helping organizations boost workforce efficiency through automation and insightful analytics.

Features

Automated Payroll Processing
Employee Self-Service (ESS) portal
Integration with attendance systems
Leave Management
Generation of PF, ESIC, TDS filings, and year-end Form 16 and other statutory reports

Pricing

Rental Silver: ₹30 per credit.
Rental Gold: ₹20 per credit.
Rental Platinum: ₹10 per credit.
Rental Diamond: ₹7 per credit.
Rental Diamond Plus: On Demand.
Outright Purchase Silver: ₹50000.
Outright Purchase Gold: ₹75000.
Outright Purchase Platinum: ₹100000.
Outright Purchase Diamond: ₹150000.

Best Suited for

IntelliPayroll is suitable for small to large enterprises.

Compare the Best Payroll Software in Hyderabad
Payroll Software	Telangana PT Compliance	Attendance + Payroll Sync	Retirement Benefits	Multi-language Payslip	Mobile ESS	Advance & Loan	HRMS + Payroll in One
factoHR
Keka
247HRM
Spine Payroll
SumoPayroll
Super Payrol
WalletHR
HROne
Nitso Technologies
IntelliPayroll

Payroll Compliance Rules in Hyderabad, Telangana

Additionally, we are listing some major payroll compliance rules that you need to follow as a firm operating in Hyderabad. Read the given table, and add these rules to your payroll policies if you haven’t.

Note: This table was last updated on 15/05/2026.

Rule	Penalty
Professional Tax: Nil up to ₹15,000/month. ₹150/month for ₹15,001 to ₹20,000. ₹200/month above ₹20,000. Telangana Tax on Professions, Trades, Callings and Employments Act, 1987 (Act No. 22 of 1987), adapted via G.O.Ms. No.169, dated September 18, 2015.	Failure to deduct or pay: interest as prescribed per month. Section 11. Penalty 25% to 50% of the tax due. Section 12. Late registration: the employer is charged ₹10- ₹20 per day. Section 6(5). Late return: ₹5 – ₹100/day. Section 7(3).
Labour Welfare Fund: 20+ employees. Employee ₹2, employer ₹5 per year. Section 10, Telangana LWF Act, 1987 (Act No. 34 of 1987), adapted via G.O.Ms. No.6, dated February 1, 2016.	Interest on late payment after notice of demand (1% for the first 3 months, 1.5% thereafter). Section 9. Obstruction or failure to produce documents: Section 25. Non-compliance with Board direction: Section 30.
Provident Fund: 20+ employees. 12% each. Due by the 15th. Code on Social Security, 2020, Chapter III.	12% p.a. interest. EPF and MP Act, Section 7Q. Penal damages up to arrears. Section 14B.
ESIC: 10+ employees. Employer 3.25%, employee 0.75%. Ceiling ₹21,000/month. Due by the 15th. Code on Social Security, 2020, Chapter IV.	Deducted share not remitted: 1 to 3 years plus ₹1 lakh. Section 133(1)(i). Other defaults: 2 to 6 months of imprisonment and ₹50,000. Section 133(1)(ii).
TDS on Salary: Deduct monthly. Remit by the 7th of the following month. File Form 24Q quarterly. Section 192, Income Tax Act, 1961.	Non deduction: 1%/month. Deducted but not remitted: 1.5%/month. Section 201(1A). Penalty equal to tax not deducted. Section 271C. Prosecution: 3 months to 7 years. Section 276B.
Bonus: 20+ employees. Salary ceiling ₹21000/month. Minimum 8.33%, maximum 20%. Due within 8 months of the accounting year close. Payment of Bonus Act, 1965, Sections 10 and 11, subsumed under Code on Wages, 2019.	Imprisonment up to 6 months and/or fine up to ₹1000. Section 28, Payment of Bonus Act, 1965.
Minimum Wages: Must pay at or above the Telangana notified scheduled rate. Code on Wages, 2019, Section 6.	First offense: fine up to ₹50000. Repeat within 5 years: up to 3 months imprisonment plus a fine of up to ₹1 lakh. Section 51, Code on Wages, 2019.
50% Wage Rule: Basic wages must be at least 50% of CTC. Code on Wages, 2019, Section 2(y). Applies for PF computation under Section 2(88), Code on Social Security, 2020.	PF shortfall treated as arrears plus interest. Section 7Q and Section 14B, EPF and MP Act, 1952.
Gratuity: Payable after 5 years of continuous service. 15 days’ wages per completed year. Code on Social Security, 2020, Chapter V, Section 53.	False statement: up to 6 months and/or a fine of up to ₹10000. Section 58(1). General contravention: 3 months to 1 year and/or ₹10000 to ₹20000. Section 58(2). Non-payment: 6 months to 2 years. Section 58(3).
Shops and Establishments: Overtime paid at twice the ordinary rate of wages. Section 37, Telangana Shops and Establishments Act, 1988 (Act No. 20 of 1988), adapted via G.O.Ms. No.5, dated February 1, 2016. Time of payment of wages: Section 38. Service compensation on termination: Section 47.	False statement under registration: fine up to ₹100. Section 61(1). General wage deductions and delayed payment violations: Section 61(2).

Why do You Need Payroll Software in Hyderabad?

Here are five reasons why you must have payroll software in Hyderabad. –

In localities like HITEC City and Gachibowli, IT firms requiring 24/7 shift management support would benefit from having software that integrates and automatically calculates shift-based payroll.
Hyderabad is home to over 400 GCCs (Global Capability Centers). An HR and payroll software that provides flexible shift rosters and offers multi-country compliance would significantly lessen the admin burden.
The Telangana government recently increased the overtime cap to 10 hours a day. Firms can get updates related to such changes with compliance support.
A payroll management software can help you configure policies for state-specific holidays.
Lastly, a cloud-based payroll software in Hyderabad prepares statutory-compliant reports that firms can directly upload to tax portals.

factoHR Helping Hyderabad Businesses Manage Payroll with Confidence

At a time when businesses in Hyderabad are increasingly dominated by IT and startups, and security and statutory compliance are becoming more nuanced, manually managing payroll is no longer viable. Form I, TLWF, PT, EPF, new labour codes, and the DPDP Act are only some of the regulations that firms located in Hyderabad require to comply with.

factoHR is a cloud-based HR and payroll software that not only helps you comply with payroll regulations but also simplifies all the operations in the hire-to-retire cycle. With its flexible, formula-driven payroll engine, you can configure as many CTC structures and different payroll policies as you require. For startups, it offers customizable plans and addons that streamline their workflows. For MNCs, it offers support in 20+ countries. Evaluate your current software, and make an informed decision.

FAQs

Which is the Best Payroll Software for Businesses in Hyderabad?

The best payroll software for businesses in Hyderabad is:

factoHR
Zoho
Keka
GreytHR
Zimyo

What Features Should I Look for in Payroll Software in Hyderabad?

Features you should look for in payroll software in Hyderabad are automated payroll processing with tax compliance to local laws, an ESS portal, integration with accounting systems, scalability, and the elimination of payroll errors.

Are there Payroll Tools that Support Regional Languages for Employees in Hyderabad?

Yes, there are payroll tools that support regional languages for employees in Hyderabad.

What Kind of Customer Support Can I Expect from Hyderabad-Based Payroll Software Providers?

Hyderabad-based payroll software providers typically offer multi-channel support, such as phone, email, and chat, along with dedicated account managers and local assistance to ensure quick issue resolution and smooth implementation.

How do I Choose between Cloud and On-Premise Payroll Software in Hyderabad?

To choose between cloud and on-premise payroll software in Hyderabad, consider business needs. Choose cloud-based for flexibility, remote access, and lower upfront costs, or on-premise for greater control and data security despite higher initial investment and maintenance requirements.

Can Hyderabad Payroll Software Handle Multi-Branch or Multi-Location Payroll?

Yes, most Hyderabad payroll software solutions can handle multi-branch or multi-location payroll.

Meet the author

Sales Manager

Reshmika Rakholiya is a Sales Manager at factoHR with 11+ years of experience across the IT and Manufacturing industries. She is a proven expert in delivering end-to-end HRMS and PF trust solutions to more than 4,000 businesses. Her strong background in sales strategy and business growth ensures that the content provides clear, practical insights into ROI, cost optimization, and long-term value for HR and business leaders.